Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 AC093520.2-201ENST00000561830 333 ntBASIC17.88■□□□□ 0.45
BEST2Q8NFU1 LINC01225-203ENST00000563550 1244 ntBASIC17.88■□□□□ 0.45
BEST2Q8NFU1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
BEST2Q8NFU1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AC009093.7-201ENST00000623853 1223 ntBASIC17.87■□□□□ 0.45
BEST2Q8NFU1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
BEST2Q8NFU1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AC020765.3-201ENST00000613051 740 ntBASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 AC078925.2-201ENST00000624013 1973 ntBASIC17.86■□□□□ 0.45
BEST2Q8NFU1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BEST2Q8NFU1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BEST2Q8NFU1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms