Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.25■□□□□ 0.35
SCML4Q8N228 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.25■□□□□ 0.35
SCML4Q8N228 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.25■□□□□ 0.35
SCML4Q8N228 AC005237.2-201ENST00000434368 219 ntBASIC17.25■□□□□ 0.35
SCML4Q8N228 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.25■□□□□ 0.35
SCML4Q8N228 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.25■□□□□ 0.35
SCML4Q8N228 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SCML4Q8N228 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SCML4Q8N228 AL596442.2-201ENST00000610240 980 ntBASIC17.25■□□□□ 0.35
SCML4Q8N228 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.25■□□□□ 0.35
SCML4Q8N228 ME2P1-201ENST00000426028 1970 ntBASIC17.25■□□□□ 0.35
SCML4Q8N228 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCML4Q8N228 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.25■□□□□ 0.35
SCML4Q8N228 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCML4Q8N228 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SCML4Q8N228 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 RPS8P6-201ENST00000426177 609 ntBASIC17.24■□□□□ 0.35
SCML4Q8N228 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.24■□□□□ 0.35
SCML4Q8N228 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.24■□□□□ 0.35
SCML4Q8N228 HLA-J-203ENST00000494367 1087 ntBASIC17.24■□□□□ 0.35
SCML4Q8N228 AC098859.1-201ENST00000502915 1238 ntBASIC17.24■□□□□ 0.35
SCML4Q8N228 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.24■□□□□ 0.35
SCML4Q8N228 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.24■□□□□ 0.35
SCML4Q8N228 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.24■□□□□ 0.35
SCML4Q8N228 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.24■□□□□ 0.35
SCML4Q8N228 HTR7P1-202ENST00000624664 4411 ntBASIC17.24■□□□□ 0.35
SCML4Q8N228 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SCML4Q8N228 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SCML4Q8N228 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.24■□□□□ 0.35
SCML4Q8N228 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCML4Q8N228 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.23■□□□□ 0.35
SCML4Q8N228 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.23■□□□□ 0.35
SCML4Q8N228 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SCML4Q8N228 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.23■□□□□ 0.35
SCML4Q8N228 FAM58DP-201ENST00000428076 619 ntBASIC17.23■□□□□ 0.35
SCML4Q8N228 GPS2P2-201ENST00000430745 888 ntBASIC17.23■□□□□ 0.35
SCML4Q8N228 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.23■□□□□ 0.35
SCML4Q8N228 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.23■□□□□ 0.35
SCML4Q8N228 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.23■□□□□ 0.35
SCML4Q8N228 AL512356.2-201ENST00000546955 174 ntBASIC17.23■□□□□ 0.35
SCML4Q8N228 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.23■□□□□ 0.35
SCML4Q8N228 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.23■□□□□ 0.35
SCML4Q8N228 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.23■□□□□ 0.35
SCML4Q8N228 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SCML4Q8N228 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.23■□□□□ 0.35
SCML4Q8N228 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.23■□□□□ 0.35
SCML4Q8N228 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCML4Q8N228 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCML4Q8N228 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms