Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR1909-201ENST00000411312 80 ntBASIC17.96■□□□□ 0.47
HERC6Q8IVU3 AC087499.6-201ENST00000411576 835 ntBASIC17.96■□□□□ 0.47
HERC6Q8IVU3 ACA64.2-201ENST00000459014 129 ntBASIC17.96■□□□□ 0.47
HERC6Q8IVU3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 AC133963.1-201ENST00000504166 1679 ntBASIC17.96■□□□□ 0.47
HERC6Q8IVU3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.96■□□□□ 0.47
HERC6Q8IVU3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.96■□□□□ 0.46
HERC6Q8IVU3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
HERC6Q8IVU3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AL391825.1-201ENST00000457671 1364 ntBASIC17.95■□□□□ 0.46
HERC6Q8IVU3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AC132938.2-201ENST00000579188 680 ntBASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AL591163.1-201ENST00000641757 987 ntBASIC17.95■□□□□ 0.46
HERC6Q8IVU3 AL355312.1-201ENST00000407115 2176 ntBASIC17.95■□□□□ 0.46
HERC6Q8IVU3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HERC6Q8IVU3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 FAM220BP-201ENST00000377689 816 ntBASIC17.94■□□□□ 0.46
HERC6Q8IVU3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 AC011495.1-201ENST00000498085 584 ntBASIC17.94■□□□□ 0.46
HERC6Q8IVU3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 MIR6805-201ENST00000615055 62 ntBASIC17.94■□□□□ 0.46
HERC6Q8IVU3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.94■□□□□ 0.46
HERC6Q8IVU3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HERC6Q8IVU3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.93■□□□□ 0.46
HERC6Q8IVU3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms