Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 AC087163.2-201ENST00000457299 853 ntBASIC17.67■□□□□ 0.42
RNF135Q8IUD6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 HILS1-202ENST00000545329 423 ntBASIC17.67■□□□□ 0.42
RNF135Q8IUD6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF135Q8IUD6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF135Q8IUD6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF135Q8IUD6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF135Q8IUD6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF135Q8IUD6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF135Q8IUD6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.64■□□□□ 0.42
RNF135Q8IUD6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms