Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC099063.4-201ENST00000641099 1602 ntBASIC14.9□□□□□ -0.02
LRRC28Q86X40 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRC28Q86X40 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRRC28Q86X40 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AC132008.2-207ENST00000454517 770 ntBASIC14.89□□□□□ -0.03
LRRC28Q86X40 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 REXO1L6P-202ENST00000619970 1078 ntBASIC14.89□□□□□ -0.03
LRRC28Q86X40 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRC28Q86X40 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRRC28Q86X40 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 DBET-201ENST00000630918 3363 ntBASIC14.88□□□□□ -0.03
LRRC28Q86X40 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRC28Q86X40 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRC28Q86X40 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms