Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 TOP3BP1-201ENST00000420768 1380 ntBASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AC096582.2-201ENST00000510860 516 ntBASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AL353135.1-201ENST00000606729 504 ntBASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AC073592.4-201ENST00000623827 446 ntBASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 AP005117.1-202ENST00000581724 1908 ntBASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRTM1Q86UE6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 AC016734.2-201ENST00000624325 1377 ntBASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 BX276092.5-203ENST00000456199 560 ntBASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 AL121672.3-201ENST00000608644 468 ntBASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRTM1Q86UE6 KRT8P39-201ENST00000396270 1433 ntBASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRRTM1Q86UE6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms