Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 MKNK2P1-201ENST00000437526 628 ntBASIC17.5■□□□□ 0.39
RNF43Q68DV7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 HLA-J-203ENST00000494367 1087 ntBASIC17.5■□□□□ 0.39
RNF43Q68DV7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AL078644.1-201ENST00000609881 752 ntBASIC17.5■□□□□ 0.39
RNF43Q68DV7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF43Q68DV7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF43Q68DV7 AC093525.9-201ENST00000624961 1746 ntBASIC17.5■□□□□ 0.39
RNF43Q68DV7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 ELL2P1-201ENST00000413990 1906 ntBASIC17.49■□□□□ 0.39
RNF43Q68DV7 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.49■□□□□ 0.39
RNF43Q68DV7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF43Q68DV7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF43Q68DV7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 AC022188.1-201ENST00000620960 1664 ntBASIC17.48■□□□□ 0.39
RNF43Q68DV7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 CYP2T1P-202ENST00000641596 2535 ntBASIC17.48■□□□□ 0.39
RNF43Q68DV7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 AC023141.13-201ENST00000604991 943 ntBASIC17.48■□□□□ 0.39
RNF43Q68DV7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF43Q68DV7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF43Q68DV7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms