Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 PPP1R14BP2-201ENST00000426284 444 ntBASIC8.44□□□□□ -1.06
LINC01554Q52M75 CROCCP5-201ENST00000436658 830 ntBASIC8.44□□□□□ -1.06
LINC01554Q52M75 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 DLX3-202ENST00000512495 834 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AL121829.2-201ENST00000620908 328 ntBASIC8.44□□□□□ -1.06
LINC01554Q52M75 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AC041040.2-201ENST00000622926 2899 ntBASIC8.44□□□□□ -1.06
LINC01554Q52M75 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC8.44□□□□□ -1.06
LINC01554Q52M75 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LINC01554Q52M75 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LINC01554Q52M75 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC8.43□□□□□ -1.06
LINC01554Q52M75 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01554Q52M75 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC8.43□□□□□ -1.06
LINC01554Q52M75 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 CYP2T1P-202ENST00000641596 2535 ntBASIC8.43□□□□□ -1.06
LINC01554Q52M75 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC8.43□□□□□ -1.06
LINC01554Q52M75 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC8.43□□□□□ -1.06
LINC01554Q52M75 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LINC01554Q52M75 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms