Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 KRT18P35-201ENST00000510488 1269 ntBASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.16■□□□□ 0.18
ATP6AP1LQ52LC2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 FOSL1P1-201ENST00000511041 816 ntBASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 AL445228.2-201ENST00000605589 952 ntBASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 AC132872.4-202ENST00000622924 2756 ntBASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATP6AP1LQ52LC2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
ATP6AP1LQ52LC2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 PAWRP1-201ENST00000451083 565 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 AC139887.3-201ENST00000568585 713 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 MPDU1-223ENST00000582151 728 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 MTDHP3-201ENST00000594186 672 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 AL732292.2-201ENST00000609649 430 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 AC093458.2-201ENST00000623150 629 ntBASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATP6AP1LQ52LC2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms