Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC144BQ3MJ40 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 LINC02012-201ENST00000608206 1725 ntBASIC19.34■□□□□ 0.69
CCDC144BQ3MJ40 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC144BQ3MJ40 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 AC002056.1-201ENST00000395613 760 ntBASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 TIMM8BP1-201ENST00000452384 211 ntBASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 AC093520.2-201ENST00000561830 333 ntBASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 LINC00628-201ENST00000628516 1289 ntBASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC144BQ3MJ40 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC144BQ3MJ40 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 AL355306.1-201ENST00000415580 579 ntBASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 BCRP1-201ENST00000444246 691 ntBASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC144BQ3MJ40 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms