Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 LINC01144-201ENST00000626198 1710 ntBASIC20.03■□□□□ 0.8
RFX7Q2KHR2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 DUX4L27-201ENST00000554796 1261 ntBASIC20.03■□□□□ 0.8
RFX7Q2KHR2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFX7Q2KHR2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.02■□□□□ 0.8
RFX7Q2KHR2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 AC016027.1-202ENST00000607927 1699 ntBASIC20.02■□□□□ 0.8
RFX7Q2KHR2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 POU5F1P6-201ENST00000466990 990 ntBASIC20.02■□□□□ 0.8
RFX7Q2KHR2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.02■□□□□ 0.8
RFX7Q2KHR2 MTHFR-217ENST00000641820 1569 ntBASIC20.02■□□□□ 0.8
RFX7Q2KHR2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFX7Q2KHR2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 PCDHA14-201ENST00000506751 2298 ntBASIC20.01■□□□□ 0.79
RFX7Q2KHR2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC026150.2-201ENST00000564693 1156 ntBASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AP000842.3-202ENST00000569238 1080 ntBASIC20.01■□□□□ 0.79
RFX7Q2KHR2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFX7Q2KHR2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms