Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX3P78415 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
IRX3P78415 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX3P78415 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.38■□□□□ 0.69
IRX3P78415 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.38■□□□□ 0.69
IRX3P78415 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX3P78415 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX3P78415 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.38■□□□□ 0.69
IRX3P78415 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.38■□□□□ 0.69
IRX3P78415 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 AC021097.1-201ENST00000607902 574 ntBASIC19.38■□□□□ 0.69
IRX3P78415 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 AC073592.8-201ENST00000624126 511 ntBASIC19.38■□□□□ 0.69
IRX3P78415 AL021920.2-201ENST00000624828 1351 ntBASIC19.38■□□□□ 0.69
IRX3P78415 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX3P78415 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.38■□□□□ 0.69
IRX3P78415 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
IRX3P78415 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.38■□□□□ 0.69
IRX3P78415 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX3P78415 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX3P78415 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX3P78415 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
IRX3P78415 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
IRX3P78415 AC016396.2-201ENST00000562575 1417 ntBASIC19.37■□□□□ 0.69
IRX3P78415 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX3P78415 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.37■□□□□ 0.69
IRX3P78415 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
IRX3P78415 AC027369.6-201ENST00000525520 931 ntBASIC19.37■□□□□ 0.69
IRX3P78415 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX3P78415 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
IRX3P78415 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.37■□□□□ 0.69
IRX3P78415 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
IRX3P78415 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.37■□□□□ 0.69
IRX3P78415 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
IRX3P78415 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.36■□□□□ 0.69
IRX3P78415 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.36■□□□□ 0.69
IRX3P78415 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
IRX3P78415 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
IRX3P78415 AC105233.2-201ENST00000523697 349 ntBASIC19.36■□□□□ 0.69
IRX3P78415 AF228730.5-201ENST00000530288 346 ntBASIC19.36■□□□□ 0.69
IRX3P78415 CYP2A7P1-201ENST00000595391 815 ntBASIC19.36■□□□□ 0.69
IRX3P78415 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 AC003101.2-201ENST00000612557 442 ntBASIC19.36■□□□□ 0.69
IRX3P78415 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
IRX3P78415 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
IRX3P78415 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
IRX3P78415 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
IRX3P78415 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms