Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CMC4P56277 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.4□□□□□ -0.42
CMC4P56277 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.4□□□□□ -0.42
CMC4P56277 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CMC4P56277 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CMC4P56277 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.4□□□□□ -0.43
CMC4P56277 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CMC4P56277 LINC01144-201ENST00000626198 1710 ntBASIC12.4□□□□□ -0.43
CMC4P56277 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.4□□□□□ -0.43
CMC4P56277 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CMC4P56277 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.39□□□□□ -0.43
CMC4P56277 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.39□□□□□ -0.43
CMC4P56277 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.39□□□□□ -0.43
CMC4P56277 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.39□□□□□ -0.43
CMC4P56277 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
CMC4P56277 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.39□□□□□ -0.43
CMC4P56277 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.39□□□□□ -0.43
CMC4P56277 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 AL671883.3-201ENST00000603274 991 ntBASIC12.39□□□□□ -0.43
CMC4P56277 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 AC005332.8-201ENST00000622750 2735 ntBASIC12.39□□□□□ -0.43
CMC4P56277 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.39□□□□□ -0.43
CMC4P56277 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CMC4P56277 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CMC4P56277 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CMC4P56277 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CMC4P56277 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.38□□□□□ -0.43
CMC4P56277 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CMC4P56277 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.38□□□□□ -0.43
CMC4P56277 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CMC4P56277 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms