Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 REXO1L6P-202ENST00000619970 1078 ntBASIC16.35■□□□□ 0.21
CDH13P55290 REXO1L3P-201ENST00000622202 1288 ntBASIC16.35■□□□□ 0.21
CDH13P55290 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDH13P55290 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.35■□□□□ 0.21
CDH13P55290 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH13P55290 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH13P55290 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH13P55290 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDH13P55290 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH13P55290 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH13P55290 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH13P55290 AC021087.4-201ENST00000563761 564 ntBASIC16.34■□□□□ 0.21
CDH13P55290 PRELID1P1-202ENST00000567272 903 ntBASIC16.34■□□□□ 0.21
CDH13P55290 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH13P55290 MIR4492-201ENST00000581627 80 ntBASIC16.34■□□□□ 0.21
CDH13P55290 AC025062.2-201ENST00000605477 670 ntBASIC16.34■□□□□ 0.21
CDH13P55290 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CDH13P55290 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 AL031731.1-201ENST00000642131 2094 ntBASIC16.34■□□□□ 0.21
CDH13P55290 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CDH13P55290 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH13P55290 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH13P55290 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH13P55290 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CDH13P55290 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH13P55290 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH13P55290 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CDH13P55290 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CDH13P55290 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH13P55290 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CDH13P55290 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH13P55290 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH13P55290 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH13P55290 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH13P55290 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH13P55290 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH13P55290 ELK2BP-201ENST00000415014 1224 ntBASIC16.33■□□□□ 0.2
CDH13P55290 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH13P55290 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.33■□□□□ 0.2
CDH13P55290 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CDH13P55290 SLC25A6P2-201ENST00000497974 877 ntBASIC16.33■□□□□ 0.2
CDH13P55290 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH13P55290 AF238378.1-201ENST00000526806 358 ntBASIC16.33■□□□□ 0.2
CDH13P55290 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.33■□□□□ 0.2
CDH13P55290 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH13P55290 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH13P55290 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.33■□□□□ 0.2
CDH13P55290 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH13P55290 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH13P55290 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH13P55290 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms