Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EMP3P54852 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.3■□□□□ 0.2
EMP3P54852 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.3■□□□□ 0.2
EMP3P54852 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.3■□□□□ 0.2
EMP3P54852 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC16.3■□□□□ 0.2
EMP3P54852 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC16.3■□□□□ 0.2
EMP3P54852 SEPHS1P7-201ENST00000452995 1177 ntBASIC16.3■□□□□ 0.2
EMP3P54852 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.3■□□□□ 0.2
EMP3P54852 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC16.3■□□□□ 0.2
EMP3P54852 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC16.3■□□□□ 0.2
EMP3P54852 AL671883.3-201ENST00000603274 991 ntBASIC16.3■□□□□ 0.2
EMP3P54852 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EMP3P54852 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.3■□□□□ 0.2
EMP3P54852 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
EMP3P54852 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EMP3P54852 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EMP3P54852 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
EMP3P54852 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
EMP3P54852 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
EMP3P54852 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 PI4KAP1-204ENST00000612579 1703 ntBASIC16.29■□□□□ 0.2
EMP3P54852 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EMP3P54852 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 CRYGEP-201ENST00000412192 528 ntBASIC16.29■□□□□ 0.2
EMP3P54852 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 VN2R19P-201ENST00000442399 1052 ntBASIC16.29■□□□□ 0.2
EMP3P54852 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.29■□□□□ 0.2
EMP3P54852 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.29■□□□□ 0.2
EMP3P54852 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 AC099063.4-201ENST00000641099 1602 ntBASIC16.29■□□□□ 0.2
EMP3P54852 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
EMP3P54852 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.29■□□□□ 0.2
EMP3P54852 EGFEM1P-202ENST00000431685 1563 ntBASIC16.29■□□□□ 0.2
EMP3P54852 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EMP3P54852 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EMP3P54852 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.28■□□□□ 0.2
EMP3P54852 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EMP3P54852 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.28■□□□□ 0.2
EMP3P54852 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.28■□□□□ 0.2
EMP3P54852 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.28■□□□□ 0.2
EMP3P54852 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
EMP3P54852 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EMP3P54852 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.28■□□□□ 0.2
EMP3P54852 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC16.28■□□□□ 0.2
EMP3P54852 AC092905.1-201ENST00000467527 949 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms