Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PMS1P54277 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 AC004870.1-201ENST00000315132 882 ntBASIC18.33■□□□□ 0.52
PMS1P54277 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
PMS1P54277 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.33■□□□□ 0.52
PMS1P54277 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 AL031284.1-201ENST00000419297 478 ntBASIC18.33■□□□□ 0.52
PMS1P54277 FAM185BP-201ENST00000443595 716 ntBASIC18.33■□□□□ 0.52
PMS1P54277 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.33■□□□□ 0.52
PMS1P54277 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.33■□□□□ 0.52
PMS1P54277 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.33■□□□□ 0.52
PMS1P54277 PGM5P2-202ENST00000637225 1043 ntBASIC18.33■□□□□ 0.52
PMS1P54277 AL365203.3-201ENST00000609742 2057 ntBASIC18.33■□□□□ 0.52
PMS1P54277 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.33■□□□□ 0.52
PMS1P54277 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PMS1P54277 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.33■□□□□ 0.52
PMS1P54277 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.33■□□□□ 0.52
PMS1P54277 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 HCG4-201ENST00000418983 998 ntBASIC18.32■□□□□ 0.52
PMS1P54277 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 AC098831.1-202ENST00000438821 336 ntBASIC18.32■□□□□ 0.52
PMS1P54277 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 AL160237.2-201ENST00000556165 472 ntBASIC18.32■□□□□ 0.52
PMS1P54277 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 AL773604.1-201ENST00000617417 272 ntBASIC18.32■□□□□ 0.52
PMS1P54277 AC116407.3-201ENST00000623905 1129 ntBASIC18.32■□□□□ 0.52
PMS1P54277 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.32■□□□□ 0.52
PMS1P54277 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
PMS1P54277 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PMS1P54277 AC024909.3-201ENST00000611513 2257 ntBASIC18.32■□□□□ 0.52
PMS1P54277 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.31■□□□□ 0.52
PMS1P54277 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.31■□□□□ 0.52
PMS1P54277 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 AL139384.1-201ENST00000612143 3047 ntBASIC18.31■□□□□ 0.52
PMS1P54277 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 IGLL3P-201ENST00000412472 434 ntBASIC18.31■□□□□ 0.52
PMS1P54277 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.31■□□□□ 0.52
PMS1P54277 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.31■□□□□ 0.52
PMS1P54277 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 AC010654.1-201ENST00000615722 808 ntBASIC18.31■□□□□ 0.52
PMS1P54277 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.31■□□□□ 0.52
PMS1P54277 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PMS1P54277 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PMS1P54277 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.31■□□□□ 0.52
PMS1P54277 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PMS1P54277 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 AC006449.6-201ENST00000612330 2296 ntBASIC18.3■□□□□ 0.52
PMS1P54277 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms