Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.5■□□□□ 0.55
LBX1P52954 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LBX1P52954 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.49■□□□□ 0.55
LBX1P52954 INTS4P2-202ENST00000614726 2019 ntBASIC18.49■□□□□ 0.55
LBX1P52954 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 LYSMD4-203ENST00000378904 2122 ntBASIC18.49■□□□□ 0.55
LBX1P52954 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.49■□□□□ 0.55
LBX1P52954 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 AL139010.1-201ENST00000454878 894 ntBASIC18.49■□□□□ 0.55
LBX1P52954 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.49■□□□□ 0.55
LBX1P52954 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.49■□□□□ 0.55
LBX1P52954 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.49■□□□□ 0.55
LBX1P52954 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.49■□□□□ 0.55
LBX1P52954 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
LBX1P52954 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 REXO1L9P-201ENST00000604264 2108 ntBASIC18.49■□□□□ 0.55
LBX1P52954 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LBX1P52954 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.49■□□□□ 0.55
LBX1P52954 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.49■□□□□ 0.55
LBX1P52954 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LBX1P52954 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LBX1P52954 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LBX1P52954 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
LBX1P52954 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.48■□□□□ 0.55
LBX1P52954 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.48■□□□□ 0.55
LBX1P52954 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 MIR1227-201ENST00000408484 88 ntBASIC18.48■□□□□ 0.55
LBX1P52954 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.48■□□□□ 0.55
LBX1P52954 COX5BP1-201ENST00000507622 393 ntBASIC18.48■□□□□ 0.55
LBX1P52954 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.48■□□□□ 0.55
LBX1P52954 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 AL133499.1-201ENST00000596207 608 ntBASIC18.48■□□□□ 0.55
LBX1P52954 RN7SL736P-201ENST00000613111 269 ntBASIC18.48■□□□□ 0.55
LBX1P52954 MIR6756-201ENST00000616240 63 ntBASIC18.48■□□□□ 0.55
LBX1P52954 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 AC135776.1-201ENST00000319817 2481 ntBASIC18.48■□□□□ 0.55
LBX1P52954 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.48■□□□□ 0.55
LBX1P52954 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LBX1P52954 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
LBX1P52954 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.48■□□□□ 0.55
LBX1P52954 AL031598.1-201ENST00000561511 1773 ntBASIC18.47■□□□□ 0.55
LBX1P52954 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.47■□□□□ 0.55
LBX1P52954 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.47■□□□□ 0.55
LBX1P52954 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LBX1P52954 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LBX1P52954 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LBX1P52954 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LBX1P52954 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LBX1P52954 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.47■□□□□ 0.55
LBX1P52954 SPTLC1P5-201ENST00000450718 252 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms