Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PDX1P52945 SLC22A20-204ENST00000530038 1673 ntBASIC16.18■□□□□ 0.18
PDX1P52945 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
PDX1P52945 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 AL353732.1-201ENST00000569618 1459 ntBASIC16.17■□□□□ 0.18
PDX1P52945 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.17■□□□□ 0.18
PDX1P52945 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 AC002472.2-201ENST00000442739 958 ntBASIC16.17■□□□□ 0.18
PDX1P52945 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.17■□□□□ 0.18
PDX1P52945 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 IGHV3-62-201ENST00000520057 340 ntBASIC16.17■□□□□ 0.18
PDX1P52945 KRT8P23-201ENST00000560090 1207 ntBASIC16.17■□□□□ 0.18
PDX1P52945 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PDX1P52945 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.17■□□□□ 0.18
PDX1P52945 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.17■□□□□ 0.18
PDX1P52945 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 UXT-AS1-201ENST00000590504 1525 ntBASIC16.17■□□□□ 0.18
PDX1P52945 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.17■□□□□ 0.18
PDX1P52945 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PDX1P52945 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PDX1P52945 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.16■□□□□ 0.18
PDX1P52945 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.16■□□□□ 0.18
PDX1P52945 SLC25A1P3-201ENST00000395415 828 ntBASIC16.16■□□□□ 0.18
PDX1P52945 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 TREML5P-201ENST00000421694 576 ntBASIC16.16■□□□□ 0.18
PDX1P52945 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.16■□□□□ 0.18
PDX1P52945 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 SLC25A39P2-201ENST00000537614 270 ntBASIC16.16■□□□□ 0.18
PDX1P52945 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.16■□□□□ 0.18
PDX1P52945 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.16■□□□□ 0.18
PDX1P52945 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.16■□□□□ 0.18
PDX1P52945 AC140878.1-201ENST00000565277 250 ntBASIC16.16■□□□□ 0.18
PDX1P52945 RN7SL204P-201ENST00000582831 262 ntBASIC16.16■□□□□ 0.18
PDX1P52945 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.16■□□□□ 0.18
PDX1P52945 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 AF228730.6-201ENST00000641497 218 ntBASIC16.16■□□□□ 0.18
PDX1P52945 AC084121.3-201ENST00000641716 218 ntBASIC16.16■□□□□ 0.18
PDX1P52945 AC105233.6-201ENST00000642093 218 ntBASIC16.16■□□□□ 0.18
PDX1P52945 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDX1P52945 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDX1P52945 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.16■□□□□ 0.18
PDX1P52945 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms