Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.92■□□□□ 0.14
PRIM2P49643 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 SART3-203ENST00000546611 1184 ntBASIC15.92■□□□□ 0.14
PRIM2P49643 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.92■□□□□ 0.14
PRIM2P49643 MTDHP4-201ENST00000600287 670 ntBASIC15.92■□□□□ 0.14
PRIM2P49643 IFNL4P1-201ENST00000607083 540 ntBASIC15.92■□□□□ 0.14
PRIM2P49643 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.92■□□□□ 0.14
PRIM2P49643 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
PRIM2P49643 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PRIM2P49643 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.92■□□□□ 0.14
PRIM2P49643 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
PRIM2P49643 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRIM2P49643 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 AKR1C7P-201ENST00000305623 895 ntBASIC15.91■□□□□ 0.14
PRIM2P49643 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.91■□□□□ 0.14
PRIM2P49643 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.91■□□□□ 0.14
PRIM2P49643 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.91■□□□□ 0.14
PRIM2P49643 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.91■□□□□ 0.14
PRIM2P49643 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PRIM2P49643 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
PRIM2P49643 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.91■□□□□ 0.14
PRIM2P49643 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.91■□□□□ 0.14
PRIM2P49643 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PRIM2P49643 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 CYP2T1P-202ENST00000641596 2535 ntBASIC15.91■□□□□ 0.14
PRIM2P49643 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRIM2P49643 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 PCDHA1-201ENST00000378133 2726 ntBASIC15.9■□□□□ 0.14
PRIM2P49643 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 AC243591.1-201ENST00000452967 1364 ntBASIC15.9■□□□□ 0.14
PRIM2P49643 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PRIM2P49643 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.9■□□□□ 0.14
PRIM2P49643 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PRIM2P49643 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRIM2P49643 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms