Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRPHP41219 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PRPHP41219 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.81■□□□□ 0.6
PRPHP41219 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 KRT19P2-202ENST00000557173 1012 ntBASIC18.81■□□□□ 0.6
PRPHP41219 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
PRPHP41219 AC140113.2-201ENST00000604370 208 ntBASIC18.81■□□□□ 0.6
PRPHP41219 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
PRPHP41219 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 AC025580.3-201ENST00000617932 1424 ntBASIC18.81■□□□□ 0.6
PRPHP41219 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRPHP41219 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
PRPHP41219 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PRPHP41219 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 LINC01144-201ENST00000626198 1710 ntBASIC18.8■□□□□ 0.6
PRPHP41219 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 BCAR1-209ENST00000546196 1340 ntBASIC18.8■□□□□ 0.6
PRPHP41219 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 PCGF3-213ENST00000620529 1899 ntBASIC18.8■□□□□ 0.6
PRPHP41219 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPHP41219 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRPHP41219 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 AC140658.5-201ENST00000438532 169 ntBASIC18.8■□□□□ 0.6
PRPHP41219 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPHP41219 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.8■□□□□ 0.6
PRPHP41219 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.8■□□□□ 0.6
PRPHP41219 AC018845.2-201ENST00000568326 409 ntBASIC18.8■□□□□ 0.6
PRPHP41219 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.8■□□□□ 0.6
PRPHP41219 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.8■□□□□ 0.6
PRPHP41219 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.8■□□□□ 0.6
PRPHP41219 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRPHP41219 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.8■□□□□ 0.6
PRPHP41219 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.8■□□□□ 0.6
PRPHP41219 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRPHP41219 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRPHP41219 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRPHP41219 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.79■□□□□ 0.6
PRPHP41219 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 AC006449.5-201ENST00000610658 2098 ntBASIC18.79■□□□□ 0.6
PRPHP41219 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PRPHP41219 MED15P5-201ENST00000423150 992 ntBASIC18.79■□□□□ 0.6
PRPHP41219 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 RNA5SP416-201ENST00000516838 111 ntBASIC18.79■□□□□ 0.6
PRPHP41219 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.79■□□□□ 0.6
PRPHP41219 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRPHP41219 AL009183.1-201ENST00000603760 355 ntBASIC18.79■□□□□ 0.6
PRPHP41219 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRPHP41219 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PRPHP41219 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PRPHP41219 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms