Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SNCAP37840 FAM220CP-201ENST00000395253 831 ntBASIC13.79□□□□□ -0.2
SNCAP37840 TSPY22P-201ENST00000427496 604 ntBASIC13.79□□□□□ -0.2
SNCAP37840 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.79□□□□□ -0.2
SNCAP37840 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.79□□□□□ -0.2
SNCAP37840 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 IGHV3-41-201ENST00000613121 348 ntBASIC13.79□□□□□ -0.2
SNCAP37840 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.79□□□□□ -0.2
SNCAP37840 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.79□□□□□ -0.2
SNCAP37840 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNCAP37840 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SNCAP37840 AC006058.4-201ENST00000624016 1670 ntBASIC13.79□□□□□ -0.2
SNCAP37840 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.78□□□□□ -0.2
SNCAP37840 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 AL645929.1-201ENST00000420084 975 ntBASIC13.78□□□□□ -0.2
SNCAP37840 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
SNCAP37840 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.78□□□□□ -0.2
SNCAP37840 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.78□□□□□ -0.2
SNCAP37840 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 AC019129.2-201ENST00000609837 1235 ntBASIC13.78□□□□□ -0.2
SNCAP37840 HYMAI.1-201ENST00000620949 238 ntBASIC13.78□□□□□ -0.2
SNCAP37840 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 AC125634.1-201ENST00000438758 1403 ntBASIC13.78□□□□□ -0.2
SNCAP37840 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.78□□□□□ -0.2
SNCAP37840 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.78□□□□□ -0.2
SNCAP37840 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SNCAP37840 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.77□□□□□ -0.2
SNCAP37840 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.77□□□□□ -0.2
SNCAP37840 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SNCAP37840 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SNCAP37840 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SNCAP37840 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 TCAF2P1-201ENST00000291129 2421 ntBASIC13.77□□□□□ -0.21
SNCAP37840 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SNCAP37840 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNCAP37840 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.77□□□□□ -0.21
SNCAP37840 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms