Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 HIST3H2BA-201ENST00000436555 524 ntBASIC20.43■□□□□ 0.86
TM4SF1P30408 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TM4SF1P30408 AL139010.1-201ENST00000454878 894 ntBASIC20.43■□□□□ 0.86
TM4SF1P30408 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TM4SF1P30408 USP32P1-208ENST00000506594 1164 ntBASIC20.43■□□□□ 0.86
TM4SF1P30408 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 AC104989.1-201ENST00000519711 778 ntBASIC20.43■□□□□ 0.86
TM4SF1P30408 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.43■□□□□ 0.86
TM4SF1P30408 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
TM4SF1P30408 FAM8A2P-201ENST00000528813 1142 ntBASIC20.43■□□□□ 0.86
TM4SF1P30408 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.43■□□□□ 0.86
TM4SF1P30408 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.43■□□□□ 0.86
TM4SF1P30408 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
TM4SF1P30408 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.43■□□□□ 0.86
TM4SF1P30408 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TM4SF1P30408 PP12613-201ENST00000424958 2230 ntBASIC20.42■□□□□ 0.86
TM4SF1P30408 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
TM4SF1P30408 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 BOLA2P3-201ENST00000404566 256 ntBASIC20.42■□□□□ 0.86
TM4SF1P30408 ACTBP11-201ENST00000436287 1126 ntBASIC20.42■□□□□ 0.86
TM4SF1P30408 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.42■□□□□ 0.86
TM4SF1P30408 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.42■□□□□ 0.86
TM4SF1P30408 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF1P30408 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.42■□□□□ 0.86
TM4SF1P30408 AL583810.1-201ENST00000553344 1045 ntBASIC20.42■□□□□ 0.86
TM4SF1P30408 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.42■□□□□ 0.86
TM4SF1P30408 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.42■□□□□ 0.86
TM4SF1P30408 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.42■□□□□ 0.86
TM4SF1P30408 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 AC074044.1-201ENST00000609673 707 ntBASIC20.42■□□□□ 0.86
TM4SF1P30408 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF1P30408 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.42■□□□□ 0.86
TM4SF1P30408 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TM4SF1P30408 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TM4SF1P30408 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.42■□□□□ 0.86
TM4SF1P30408 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF1P30408 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TM4SF1P30408 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.41■□□□□ 0.86
TM4SF1P30408 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 AC010319.3-201ENST00000597028 470 ntBASIC20.41■□□□□ 0.86
TM4SF1P30408 AC020765.3-201ENST00000613051 740 ntBASIC20.41■□□□□ 0.86
TM4SF1P30408 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TM4SF1P30408 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.41■□□□□ 0.86
TM4SF1P30408 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TM4SF1P30408 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.41■□□□□ 0.86
TM4SF1P30408 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 AC067852.2-201ENST00000590513 2313 ntBASIC20.41■□□□□ 0.86
TM4SF1P30408 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TM4SF1P30408 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF1P30408 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms