Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC1P29353 AC132872.4-202ENST00000622924 2756 ntBASIC15.32■□□□□ 0.04
SHC1P29353 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.32■□□□□ 0.04
SHC1P29353 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
SHC1P29353 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHC1P29353 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SHC1P29353 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 AL671883.3-201ENST00000603274 991 ntBASIC15.32■□□□□ 0.04
SHC1P29353 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.32■□□□□ 0.04
SHC1P29353 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHC1P29353 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHC1P29353 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SHC1P29353 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHC1P29353 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC1P29353 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
SHC1P29353 AL596257.1-201ENST00000641463 2694 ntBASIC15.31■□□□□ 0.04
SHC1P29353 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SHC1P29353 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SHC1P29353 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.31■□□□□ 0.04
SHC1P29353 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.31■□□□□ 0.04
SHC1P29353 IGLL3P-201ENST00000412472 434 ntBASIC15.31■□□□□ 0.04
SHC1P29353 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.31■□□□□ 0.04
SHC1P29353 VN2R19P-201ENST00000442399 1052 ntBASIC15.31■□□□□ 0.04
SHC1P29353 AC107918.2-201ENST00000530817 355 ntBASIC15.31■□□□□ 0.04
SHC1P29353 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SHC1P29353 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SHC1P29353 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.31■□□□□ 0.04
SHC1P29353 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.3■□□□□ 0.04
SHC1P29353 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.3■□□□□ 0.04
SHC1P29353 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 LINC00554-201ENST00000564841 3011 ntBASIC15.3■□□□□ 0.04
SHC1P29353 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.3■□□□□ 0.04
SHC1P29353 AC140113.2-201ENST00000604370 208 ntBASIC15.3■□□□□ 0.04
SHC1P29353 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SHC1P29353 AC010654.1-201ENST00000615722 808 ntBASIC15.3■□□□□ 0.04
SHC1P29353 REXO1L3P-201ENST00000622202 1288 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms