Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RXRBP28702 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.43■■□□□ 1.02
RXRBP28702 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RXRBP28702 INTS4P2-202ENST00000614726 2019 ntBASIC21.43■■□□□ 1.02
RXRBP28702 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RXRBP28702 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RXRBP28702 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RXRBP28702 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.43■■□□□ 1.02
RXRBP28702 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRBP28702 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RXRBP28702 AC069218.1-201ENST00000435269 762 ntBASIC21.43■■□□□ 1.02
RXRBP28702 HIST3H2BA-201ENST00000436555 524 ntBASIC21.43■■□□□ 1.02
RXRBP28702 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRBP28702 KRT18P66-201ENST00000452970 1269 ntBASIC21.43■■□□□ 1.02
RXRBP28702 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.43■■□□□ 1.02
RXRBP28702 RPSAP36-202ENST00000494591 1261 ntBASIC21.43■■□□□ 1.02
RXRBP28702 HNRNPA1P48-202ENST00000565308 961 ntBASIC21.43■■□□□ 1.02
RXRBP28702 GNRHR2-203ENST00000581100 1187 ntBASIC21.43■■□□□ 1.02
RXRBP28702 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 LINC01115-203ENST00000606068 577 ntBASIC21.43■■□□□ 1.02
RXRBP28702 AL451050.2-201ENST00000606967 682 ntBASIC21.43■■□□□ 1.02
RXRBP28702 AC079336.7-201ENST00000623428 1078 ntBASIC21.43■■□□□ 1.02
RXRBP28702 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.43■■□□□ 1.02
RXRBP28702 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.43■■□□□ 1.02
RXRBP28702 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RXRBP28702 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RXRBP28702 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.42■■□□□ 1.02
RXRBP28702 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
RXRBP28702 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
RXRBP28702 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 MIR769-201ENST00000390225 118 ntBASIC21.42■■□□□ 1.02
RXRBP28702 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.42■■□□□ 1.02
RXRBP28702 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.42■■□□□ 1.02
RXRBP28702 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.42■■□□□ 1.02
RXRBP28702 APOA2-204ENST00000464492 530 ntTSL 3 BASIC21.42■■□□□ 1.02
RXRBP28702 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.42■■□□□ 1.02
RXRBP28702 PRKXP1-201ENST00000561423 1122 ntBASIC21.42■■□□□ 1.02
RXRBP28702 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 AP001063.1-201ENST00000568332 529 ntBASIC21.42■■□□□ 1.02
RXRBP28702 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.42■■□□□ 1.02
RXRBP28702 MIR3147-201ENST00000577811 66 ntBASIC21.42■■□□□ 1.02
RXRBP28702 AP001505.2-201ENST00000616815 443 ntBASIC21.42■■□□□ 1.02
RXRBP28702 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
RXRBP28702 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RXRBP28702 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.41■■□□□ 1.02
RXRBP28702 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.41■■□□□ 1.02
RXRBP28702 AL589702.1-201ENST00000641229 1509 ntBASIC21.41■■□□□ 1.02
RXRBP28702 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 AC006001.1-201ENST00000325130 474 ntBASIC21.41■■□□□ 1.02
RXRBP28702 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.41■■□□□ 1.02
RXRBP28702 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.41■■□□□ 1.02
RXRBP28702 EEF1DP6-201ENST00000449232 372 ntBASIC21.41■■□□□ 1.02
RXRBP28702 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.41■■□□□ 1.02
RXRBP28702 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.41■■□□□ 1.02
RXRBP28702 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.41■■□□□ 1.02
RXRBP28702 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC21.41■■□□□ 1.02
RXRBP28702 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.41■■□□□ 1.02
RXRBP28702 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC21.41■■□□□ 1.02
RXRBP28702 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.41■■□□□ 1.02
RXRBP28702 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RXRBP28702 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RXRBP28702 Z97205.2-201ENST00000564697 1639 ntBASIC21.4■■□□□ 1.02
RXRBP28702 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RXRBP28702 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RXRBP28702 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RXRBP28702 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RXRBP28702 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RXRBP28702 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RXRBP28702 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.4■■□□□ 1.02
RXRBP28702 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RXRBP28702 HOMER2P2-201ENST00000451621 847 ntBASIC21.4■■□□□ 1.02
RXRBP28702 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RXRBP28702 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC21.4■■□□□ 1.02
RXRBP28702 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms