Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VCLP18206 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.83■□□□□ 0.28
VCLP18206 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.82■□□□□ 0.28
VCLP18206 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.82■□□□□ 0.28
VCLP18206 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.82■□□□□ 0.28
VCLP18206 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
VCLP18206 RNA5SP416-201ENST00000516838 111 ntBASIC16.82■□□□□ 0.28
VCLP18206 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.82■□□□□ 0.28
VCLP18206 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
VCLP18206 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VCLP18206 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 MIR574-201ENST00000385209 96 ntBASIC16.81■□□□□ 0.28
VCLP18206 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 AP000347.1-202ENST00000435868 847 ntBASIC16.81■□□□□ 0.28
VCLP18206 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.81■□□□□ 0.28
VCLP18206 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.81■□□□□ 0.28
VCLP18206 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.81■□□□□ 0.28
VCLP18206 AC004790.2-201ENST00000623588 572 ntBASIC16.81■□□□□ 0.28
VCLP18206 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VCLP18206 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.81■□□□□ 0.28
VCLP18206 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 AC006449.5-201ENST00000610658 2098 ntBASIC16.81■□□□□ 0.28
VCLP18206 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VCLP18206 AC005915.1-201ENST00000624912 2018 ntBASIC16.8■□□□□ 0.28
VCLP18206 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.8■□□□□ 0.28
VCLP18206 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VCLP18206 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms