Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
COL11A2P13942 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
COL11A2P13942 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20■□□□□ 0.79
COL11A2P13942 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 CSF2RBP1-201ENST00000447905 391 ntBASIC20■□□□□ 0.79
COL11A2P13942 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20■□□□□ 0.79
COL11A2P13942 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20■□□□□ 0.79
COL11A2P13942 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COL11A2P13942 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 AC093525.8-201ENST00000624099 1342 ntBASIC20■□□□□ 0.79
COL11A2P13942 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20■□□□□ 0.79
COL11A2P13942 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL11A2P13942 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
COL11A2P13942 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20■□□□□ 0.79
COL11A2P13942 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
COL11A2P13942 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.99■□□□□ 0.79
COL11A2P13942 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.99■□□□□ 0.79
COL11A2P13942 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COL11A2P13942 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 GNRHR2-203ENST00000581100 1187 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 AC092933.1-201ENST00000393644 945 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL11A2P13942 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.99■□□□□ 0.79
COL11A2P13942 KRT43P-201ENST00000434019 910 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 ACTBP11-201ENST00000436287 1126 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.99■□□□□ 0.79
COL11A2P13942 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 MIR4321-201ENST00000592276 80 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.99■□□□□ 0.79
COL11A2P13942 AC009542.2-202ENST00000619004 1067 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 AC068587.10-201ENST00000641210 219 ntBASIC19.99■□□□□ 0.79
COL11A2P13942 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COL11A2P13942 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.98■□□□□ 0.79
COL11A2P13942 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 AL390961.4-201ENST00000623958 2535 ntBASIC19.98■□□□□ 0.79
COL11A2P13942 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 AC068587.3-201ENST00000526613 355 ntBASIC19.98■□□□□ 0.79
COL11A2P13942 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.98■□□□□ 0.79
COL11A2P13942 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL11A2P13942 AC244093.1-201ENST00000610837 814 ntBASIC19.98■□□□□ 0.79
COL11A2P13942 MIR6869-201ENST00000619434 62 ntBASIC19.98■□□□□ 0.79
COL11A2P13942 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.98■□□□□ 0.79
COL11A2P13942 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.98■□□□□ 0.79
COL11A2P13942 AC067852.2-201ENST00000590513 2313 ntBASIC19.97■□□□□ 0.79
COL11A2P13942 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 AL645728.1-201ENST00000366221 2101 ntBASIC19.97■□□□□ 0.79
COL11A2P13942 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms