Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CALM3P0DP25 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CALM3P0DP25 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.31■□□□□ 0.68
CALM3P0DP25 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.31■□□□□ 0.68
CALM3P0DP25 ADH5P3-201ENST00000433842 1137 ntBASIC19.31■□□□□ 0.68
CALM3P0DP25 RN7SL589P-201ENST00000481268 310 ntBASIC19.31■□□□□ 0.68
CALM3P0DP25 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CALM3P0DP25 AC112482.1-201ENST00000492080 688 ntBASIC19.31■□□□□ 0.68
CALM3P0DP25 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.31■□□□□ 0.68
CALM3P0DP25 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.31■□□□□ 0.68
CALM3P0DP25 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALM3P0DP25 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 KRT18P13-201ENST00000400056 1290 ntBASIC19.3■□□□□ 0.68
CALM3P0DP25 TFAMP1-201ENST00000412727 736 ntBASIC19.3■□□□□ 0.68
CALM3P0DP25 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CALM3P0DP25 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.3■□□□□ 0.68
CALM3P0DP25 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CALM3P0DP25 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.3■□□□□ 0.68
CALM3P0DP25 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.3■□□□□ 0.68
CALM3P0DP25 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.3■□□□□ 0.68
CALM3P0DP25 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CALM3P0DP25 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.29■□□□□ 0.68
CALM3P0DP25 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.29■□□□□ 0.68
CALM3P0DP25 AL135744.1-201ENST00000565098 629 ntBASIC19.29■□□□□ 0.68
CALM3P0DP25 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CALM3P0DP25 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CALM3P0DP25 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CALM3P0DP25 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.28■□□□□ 0.68
CALM3P0DP25 PCDHA14-201ENST00000506751 2298 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CALM3P0DP25 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.28■□□□□ 0.68
CALM3P0DP25 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.28■□□□□ 0.68
CALM3P0DP25 ME2P1-201ENST00000426028 1970 ntBASIC19.28■□□□□ 0.68
CALM3P0DP25 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CALM3P0DP25 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms