Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.11■□□□□ 0.01
FREM3P0C091 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FREM3P0C091 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
FREM3P0C091 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FREM3P0C091 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.1■□□□□ 0.01
FREM3P0C091 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.1■□□□□ 0.01
FREM3P0C091 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.1■□□□□ 0.01
FREM3P0C091 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FREM3P0C091 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FREM3P0C091 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.1■□□□□ 0.01
FREM3P0C091 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.1■□□□□ 0.01
FREM3P0C091 AC004449.1-201ENST00000564240 433 ntBASIC15.1■□□□□ 0.01
FREM3P0C091 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM3P0C091 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM3P0C091 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.09■□□□□ 0.01
FREM3P0C091 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
FREM3P0C091 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.09■□□□□ 0.01
FREM3P0C091 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.09■□□□□ 0.01
FREM3P0C091 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.09■□□□□ 0.01
FREM3P0C091 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.09■□□□□ 0.01
FREM3P0C091 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 TNRC18P3-201ENST00000441896 2691 ntBASIC15.09■□□□□ 0.01
FREM3P0C091 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 AC138932.1-201ENST00000534164 6830 ntBASIC15.09■□□□□ 0.01
FREM3P0C091 HLA-A-202ENST00000376806 1854 ntBASIC15.09■□□□□ 0.01
FREM3P0C091 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FREM3P0C091 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FREM3P0C091 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 SNX33P1-201ENST00000592116 1762 ntBASIC15.08■□□□□ 0.01
FREM3P0C091 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM3P0C091 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FREM3P0C091 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.08■□□□□ 0.01
FREM3P0C091 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FREM3P0C091 HLA-J-203ENST00000494367 1087 ntBASIC15.08■□□□□ 0.01
FREM3P0C091 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms