Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SFTPBP07988 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SFTPBP07988 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SFTPBP07988 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.58□□□□□ -0.08
SFTPBP07988 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SFTPBP07988 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.58□□□□□ -0.08
SFTPBP07988 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.58□□□□□ -0.08
SFTPBP07988 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SFTPBP07988 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.58□□□□□ -0.08
SFTPBP07988 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
SFTPBP07988 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.58□□□□□ -0.08
SFTPBP07988 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SFTPBP07988 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SFTPBP07988 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 AL020989.1-201ENST00000422979 469 ntBASIC14.57□□□□□ -0.08
SFTPBP07988 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.57□□□□□ -0.08
SFTPBP07988 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.57□□□□□ -0.08
SFTPBP07988 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.57□□□□□ -0.08
SFTPBP07988 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 AP001269.4-201ENST00000609611 512 ntBASIC14.57□□□□□ -0.08
SFTPBP07988 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.57□□□□□ -0.08
SFTPBP07988 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 TP73-AS1-207ENST00000624167 988 ntBASIC14.57□□□□□ -0.08
SFTPBP07988 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SFTPBP07988 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
SFTPBP07988 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.57□□□□□ -0.08
SFTPBP07988 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 PCDHB17P-201ENST00000539533 2393 ntBASIC14.56□□□□□ -0.08
SFTPBP07988 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.56□□□□□ -0.08
SFTPBP07988 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTPBP07988 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SFTPBP07988 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.56□□□□□ -0.08
SFTPBP07988 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 MRPL3P1-201ENST00000400109 1033 ntBASIC14.56□□□□□ -0.08
SFTPBP07988 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 SPDYE21P-201ENST00000413323 827 ntBASIC14.56□□□□□ -0.08
SFTPBP07988 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 SIGLEC30P-201ENST00000455569 941 ntBASIC14.56□□□□□ -0.08
SFTPBP07988 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.56□□□□□ -0.08
SFTPBP07988 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.56□□□□□ -0.08
SFTPBP07988 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SFTPBP07988 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTPBP07988 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTPBP07988 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTPBP07988 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms