Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 AD000864.1-201ENST00000624076 2295 ntBASIC20.01■□□□□ 0.79
APPP05067 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.01■□□□□ 0.79
APPP05067 AL603756.1-201ENST00000606511 2163 ntBASIC20.01■□□□□ 0.79
APPP05067 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
APPP05067 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
APPP05067 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
APPP05067 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.01■□□□□ 0.79
APPP05067 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
APPP05067 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
APPP05067 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
APPP05067 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20■□□□□ 0.79
APPP05067 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20■□□□□ 0.79
APPP05067 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20■□□□□ 0.79
APPP05067 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20■□□□□ 0.79
APPP05067 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20■□□□□ 0.79
APPP05067 RPS8P6-201ENST00000426177 609 ntBASIC20■□□□□ 0.79
APPP05067 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20■□□□□ 0.79
APPP05067 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20■□□□□ 0.79
APPP05067 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20■□□□□ 0.79
APPP05067 AL009183.1-201ENST00000603760 355 ntBASIC20■□□□□ 0.79
APPP05067 GPALPP1-207ENST00000611650 899 ntBASIC20■□□□□ 0.79
APPP05067 AC006538.3-201ENST00000612495 578 ntBASIC20■□□□□ 0.79
APPP05067 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20■□□□□ 0.79
APPP05067 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
APPP05067 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
APPP05067 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20■□□□□ 0.79
APPP05067 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
APPP05067 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
APPP05067 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
APPP05067 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.99■□□□□ 0.79
APPP05067 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
APPP05067 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.99■□□□□ 0.79
APPP05067 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 AC079328.2-201ENST00000561241 3354 ntBASIC19.99■□□□□ 0.79
APPP05067 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
APPP05067 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 AC211486.1-202ENST00000416371 468 ntBASIC19.99■□□□□ 0.79
APPP05067 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.99■□□□□ 0.79
APPP05067 AC211476.1-201ENST00000503899 468 ntBASIC19.99■□□□□ 0.79
APPP05067 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.99■□□□□ 0.79
APPP05067 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
APPP05067 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.99■□□□□ 0.79
APPP05067 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 ELL2P1-201ENST00000413990 1906 ntBASIC19.99■□□□□ 0.79
APPP05067 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
APPP05067 PCDHA12-202ENST00000613593 2588 ntBASIC19.99■□□□□ 0.79
APPP05067 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
APPP05067 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.99■□□□□ 0.79
APPP05067 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.99■□□□□ 0.79
APPP05067 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.99■□□□□ 0.79
APPP05067 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.98■□□□□ 0.79
APPP05067 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
APPP05067 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
APPP05067 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
APPP05067 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.98■□□□□ 0.79
APPP05067 PMS2P4-201ENST00000412466 1052 ntBASIC19.98■□□□□ 0.79
APPP05067 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.98■□□□□ 0.79
APPP05067 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
APPP05067 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.98■□□□□ 0.79
APPP05067 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms