Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.21■□□□□ 0.03
P04436 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.21■□□□□ 0.03
P04436 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.21■□□□□ 0.03
P04436 SPCS2P4-201ENST00000436160 681 ntBASIC15.21■□□□□ 0.03
P04436 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.21■□□□□ 0.03
P04436 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.21■□□□□ 0.03
P04436 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.21■□□□□ 0.03
P04436 AL139011.1-202ENST00000642063 584 ntBASIC15.21■□□□□ 0.03
P04436 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.21■□□□□ 0.03
P04436 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.21■□□□□ 0.03
P04436 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P04436 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P04436 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.21■□□□□ 0.02
P04436 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
P04436 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
P04436 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
P04436 FER1L4-210ENST00000615531 5998 ntBASIC15.2■□□□□ 0.02
P04436 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 AL671710.1-201ENST00000610245 2349 ntBASIC15.2■□□□□ 0.02
P04436 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.2■□□□□ 0.02
P04436 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
P04436 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.2■□□□□ 0.02
P04436 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.2■□□□□ 0.02
P04436 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
P04436 AC025678.2-201ENST00000562061 970 ntBASIC15.2■□□□□ 0.02
P04436 AC008267.7-201ENST00000624570 1194 ntBASIC15.2■□□□□ 0.02
P04436 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.2■□□□□ 0.02
P04436 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
P04436 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.2■□□□□ 0.02
P04436 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
P04436 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P04436 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
P04436 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
P04436 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.19■□□□□ 0.02
P04436 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.19■□□□□ 0.02
P04436 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
P04436 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.19■□□□□ 0.02
P04436 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.19■□□□□ 0.02
P04436 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.19■□□□□ 0.02
P04436 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.19■□□□□ 0.02
P04436 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
P04436 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.19■□□□□ 0.02
P04436 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.19■□□□□ 0.02
P04436 AC027307.2-201ENST00000591252 911 ntBASIC15.19■□□□□ 0.02
P04436 AC009093.7-201ENST00000623853 1223 ntBASIC15.19■□□□□ 0.02
P04436 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.19■□□□□ 0.02
P04436 LINC00628-201ENST00000628516 1289 ntBASIC15.19■□□□□ 0.02
P04436 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
P04436 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04436 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms