Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC027307.3-201ENST00000594262 1100 ntBASIC17.49■□□□□ 0.39
LMNAP02545 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LMNAP02545 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LMNAP02545 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.49■□□□□ 0.39
LMNAP02545 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.49■□□□□ 0.39
LMNAP02545 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
LMNAP02545 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LMNAP02545 GMCL1P1-201ENST00000463439 1581 ntBASIC17.49■□□□□ 0.39
LMNAP02545 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LMNAP02545 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMNAP02545 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.48■□□□□ 0.39
LMNAP02545 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 FLJ38576-201ENST00000623820 2459 ntBASIC17.48■□□□□ 0.39
LMNAP02545 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 AP002414.1-201ENST00000391405 1147 ntBASIC17.48■□□□□ 0.39
LMNAP02545 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.48■□□□□ 0.39
LMNAP02545 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.48■□□□□ 0.39
LMNAP02545 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
LMNAP02545 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 AC009093.7-201ENST00000623853 1223 ntBASIC17.48■□□□□ 0.39
LMNAP02545 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LMNAP02545 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.48■□□□□ 0.39
LMNAP02545 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.48■□□□□ 0.39
LMNAP02545 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 AC103702.1-201ENST00000548801 2630 ntBASIC17.48■□□□□ 0.39
LMNAP02545 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMNAP02545 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LMNAP02545 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.47■□□□□ 0.39
LMNAP02545 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.47■□□□□ 0.39
LMNAP02545 MIR661-201ENST00000384842 89 ntBASIC17.47■□□□□ 0.39
LMNAP02545 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LMNAP02545 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
LMNAP02545 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 AC103564.2-201ENST00000432853 1299 ntBASIC17.47■□□□□ 0.39
LMNAP02545 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.47■□□□□ 0.39
LMNAP02545 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LMNAP02545 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LMNAP02545 AP005018.1-201ENST00000525475 301 ntBASIC17.47■□□□□ 0.39
LMNAP02545 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.47■□□□□ 0.39
LMNAP02545 LINC02560-201ENST00000596379 459 ntBASIC17.47■□□□□ 0.39
LMNAP02545 AC068137.2-201ENST00000605408 478 ntBASIC17.47■□□□□ 0.39
LMNAP02545 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms