Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AL031055.1-201ENST00000606362 631 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 AC007064.4-201ENST00000637740 555 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.37■□□□□ 0.69
CDKL5O76039 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 PCGF3-213ENST00000620529 1899 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDKL5O76039 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.37■□□□□ 0.69
CDKL5O76039 LINC01144-201ENST00000626198 1710 ntBASIC19.37■□□□□ 0.69
CDKL5O76039 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL5O76039 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDKL5O76039 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 PMS2P4-201ENST00000412466 1052 ntBASIC19.36■□□□□ 0.69
CDKL5O76039 AL590627.1-203ENST00000421194 1026 ntBASIC19.36■□□□□ 0.69
CDKL5O76039 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.36■□□□□ 0.69
CDKL5O76039 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.36■□□□□ 0.69
CDKL5O76039 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL5O76039 AC023141.13-201ENST00000604991 943 ntBASIC19.36■□□□□ 0.69
CDKL5O76039 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.36■□□□□ 0.69
CDKL5O76039 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL5O76039 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL5O76039 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.36■□□□□ 0.69
CDKL5O76039 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDKL5O76039 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 CYP2T1P-202ENST00000641596 2535 ntBASIC19.35■□□□□ 0.69
CDKL5O76039 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CDKL5O76039 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.35■□□□□ 0.69
CDKL5O76039 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.35■□□□□ 0.69
CDKL5O76039 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.35■□□□□ 0.69
CDKL5O76039 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.35■□□□□ 0.69
CDKL5O76039 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 AC064836.3-201ENST00000607928 673 ntBASIC19.35■□□□□ 0.69
CDKL5O76039 BX640515.1-201ENST00000617215 977 ntBASIC19.35■□□□□ 0.69
CDKL5O76039 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.35■□□□□ 0.69
CDKL5O76039 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDKL5O76039 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDKL5O76039 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDKL5O76039 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDKL5O76039 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 ZNF259P1-201ENST00000407656 1365 ntBASIC19.34■□□□□ 0.69
CDKL5O76039 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDKL5O76039 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms