Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 MIR940-201ENST00000401276 94 ntBASIC16.77■□□□□ 0.28
RFPL1O75677 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.77■□□□□ 0.28
RFPL1O75677 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.77■□□□□ 0.28
RFPL1O75677 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.77■□□□□ 0.28
RFPL1O75677 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.77■□□□□ 0.28
RFPL1O75677 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.77■□□□□ 0.28
RFPL1O75677 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.77■□□□□ 0.28
RFPL1O75677 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.77■□□□□ 0.28
RFPL1O75677 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.77■□□□□ 0.28
RFPL1O75677 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RFPL1O75677 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFPL1O75677 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.77■□□□□ 0.27
RFPL1O75677 AL596257.1-201ENST00000641463 2694 ntBASIC16.77■□□□□ 0.27
RFPL1O75677 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFPL1O75677 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
RFPL1O75677 AC011270.2-201ENST00000624293 2550 ntBASIC16.77■□□□□ 0.27
RFPL1O75677 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.77■□□□□ 0.27
RFPL1O75677 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFPL1O75677 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFPL1O75677 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.27
RFPL1O75677 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 AL512652.2-201ENST00000625156 1716 ntBASIC16.76■□□□□ 0.27
RFPL1O75677 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RFPL1O75677 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.76■□□□□ 0.27
RFPL1O75677 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFPL1O75677 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 AL049840.3-201ENST00000602669 611 ntBASIC16.76■□□□□ 0.27
RFPL1O75677 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFPL1O75677 AL603832.2-201ENST00000566195 2125 ntBASIC16.76■□□□□ 0.27
RFPL1O75677 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RFPL1O75677 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFPL1O75677 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFPL1O75677 OR6D1P-203ENST00000641209 4860 ntBASIC16.75■□□□□ 0.27
RFPL1O75677 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.75■□□□□ 0.27
RFPL1O75677 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.75■□□□□ 0.27
RFPL1O75677 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.75■□□□□ 0.27
RFPL1O75677 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.75■□□□□ 0.27
RFPL1O75677 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.75■□□□□ 0.27
RFPL1O75677 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.75■□□□□ 0.27
RFPL1O75677 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RFPL1O75677 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RFPL1O75677 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.75■□□□□ 0.27
RFPL1O75677 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL1O75677 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.75■□□□□ 0.27
RFPL1O75677 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RFPL1O75677 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.74■□□□□ 0.27
RFPL1O75677 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFPL1O75677 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.74■□□□□ 0.27
RFPL1O75677 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFPL1O75677 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RFPL1O75677 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.74■□□□□ 0.27
RFPL1O75677 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RFPL1O75677 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL1O75677 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL1O75677 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.74■□□□□ 0.27
RFPL1O75677 PRYP5-201ENST00000451909 266 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms