Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AL928711.1-201ENST00000570165 459 ntBASIC16.02■□□□□ 0.16
PRAMEF4O60810 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 BX640515.1-201ENST00000617215 977 ntBASIC16.02■□□□□ 0.16
PRAMEF4O60810 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.02■□□□□ 0.16
PRAMEF4O60810 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.02■□□□□ 0.15
PRAMEF4O60810 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRAMEF4O60810 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 AL645728.2-201ENST00000641974 660 ntBASIC16.01■□□□□ 0.15
PRAMEF4O60810 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEF4O60810 PCDHA1-201ENST00000378133 2726 ntBASIC16.01■□□□□ 0.15
PRAMEF4O60810 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEF4O60810 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEF4O60810 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16■□□□□ 0.15
PRAMEF4O60810 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16■□□□□ 0.15
PRAMEF4O60810 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PRAMEF4O60810 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEF4O60810 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16■□□□□ 0.15
PRAMEF4O60810 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16■□□□□ 0.15
PRAMEF4O60810 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 AL031055.1-201ENST00000606362 631 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 AC004877.2-201ENST00000623941 599 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEF4O60810 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 AC025580.3-201ENST00000617932 1424 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEF4O60810 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEF4O60810 MTHFR-217ENST00000641820 1569 ntBASIC16■□□□□ 0.15
PRAMEF4O60810 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms