Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MIR3909-201ENST00000579518 119 ntBASIC15.93■□□□□ 0.14
LCMT2O60294 MTDHP5-201ENST00000598980 586 ntBASIC15.93■□□□□ 0.14
LCMT2O60294 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.93■□□□□ 0.14
LCMT2O60294 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LCMT2O60294 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 AC005052.1-201ENST00000625181 2492 ntBASIC15.92■□□□□ 0.14
LCMT2O60294 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.92■□□□□ 0.14
LCMT2O60294 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.92■□□□□ 0.14
LCMT2O60294 AC109635.5-201ENST00000533593 962 ntBASIC15.92■□□□□ 0.14
LCMT2O60294 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LCMT2O60294 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
LCMT2O60294 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.92■□□□□ 0.14
LCMT2O60294 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.92■□□□□ 0.14
LCMT2O60294 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LCMT2O60294 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 GPAA1P2-202ENST00000606848 1787 ntBASIC15.91■□□□□ 0.14
LCMT2O60294 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LCMT2O60294 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.91■□□□□ 0.14
LCMT2O60294 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LCMT2O60294 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.91■□□□□ 0.14
LCMT2O60294 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.91■□□□□ 0.14
LCMT2O60294 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.91■□□□□ 0.14
LCMT2O60294 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 AC021097.1-201ENST00000607902 574 ntBASIC15.91■□□□□ 0.14
LCMT2O60294 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
LCMT2O60294 AC091812.2-201ENST00000619081 385 ntBASIC15.91■□□□□ 0.14
LCMT2O60294 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LCMT2O60294 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.91■□□□□ 0.14
LCMT2O60294 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 AC011270.2-201ENST00000624293 2550 ntBASIC15.91■□□□□ 0.14
LCMT2O60294 GGT3P-204ENST00000453783 1664 ntBASIC15.91■□□□□ 0.14
LCMT2O60294 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LCMT2O60294 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LCMT2O60294 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LCMT2O60294 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LCMT2O60294 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.91■□□□□ 0.14
LCMT2O60294 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.9■□□□□ 0.14
LCMT2O60294 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LCMT2O60294 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LCMT2O60294 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
LCMT2O60294 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms