Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PEX1O43933 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PEX1O43933 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PEX1O43933 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PEX1O43933 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PEX1O43933 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PEX1O43933 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PEX1O43933 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.33■□□□□ 0.2
PEX1O43933 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.33■□□□□ 0.2
PEX1O43933 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
PEX1O43933 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.33■□□□□ 0.2
PEX1O43933 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.33■□□□□ 0.2
PEX1O43933 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.33■□□□□ 0.2
PEX1O43933 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.33■□□□□ 0.2
PEX1O43933 AC011467.2-201ENST00000598425 242 ntBASIC16.33■□□□□ 0.2
PEX1O43933 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PEX1O43933 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.33■□□□□ 0.2
PEX1O43933 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PEX1O43933 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.32■□□□□ 0.2
PEX1O43933 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PEX1O43933 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.32■□□□□ 0.2
PEX1O43933 INTS4P1-201ENST00000438455 1935 ntBASIC16.32■□□□□ 0.2
PEX1O43933 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 AC106795.1-205ENST00000512851 1056 ntBASIC16.32■□□□□ 0.2
PEX1O43933 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
PEX1O43933 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.32■□□□□ 0.2
PEX1O43933 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.32■□□□□ 0.2
PEX1O43933 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.32■□□□□ 0.2
PEX1O43933 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.32■□□□□ 0.2
PEX1O43933 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.32■□□□□ 0.2
PEX1O43933 SLC25A6P4-201ENST00000586535 553 ntBASIC16.32■□□□□ 0.2
PEX1O43933 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.32■□□□□ 0.2
PEX1O43933 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.32■□□□□ 0.2
PEX1O43933 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PEX1O43933 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PEX1O43933 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.31■□□□□ 0.2
PEX1O43933 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.31■□□□□ 0.2
PEX1O43933 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PEX1O43933 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.31■□□□□ 0.2
PEX1O43933 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PEX1O43933 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms