Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF13O43567 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF13O43567 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 AC006557.2-201ENST00000592985 1240 ntBASIC15.23■□□□□ 0.03
RNF13O43567 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RNF13O43567 KRT8P49-201ENST00000604166 1432 ntBASIC15.23■□□□□ 0.03
RNF13O43567 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF13O43567 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF13O43567 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RNF13O43567 LAGE3P1-201ENST00000425356 484 ntBASIC15.22■□□□□ 0.03
RNF13O43567 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF13O43567 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF13O43567 AC073648.2-201ENST00000510116 352 ntBASIC15.22■□□□□ 0.03
RNF13O43567 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF13O43567 DUX4L17-201ENST00000557360 1267 ntBASIC15.22■□□□□ 0.03
RNF13O43567 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF13O43567 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 AC025062.2-201ENST00000605477 670 ntBASIC15.22■□□□□ 0.03
RNF13O43567 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 PI4KAP1-204ENST00000612579 1703 ntBASIC15.22■□□□□ 0.03
RNF13O43567 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF13O43567 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF13O43567 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF13O43567 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF13O43567 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF13O43567 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF13O43567 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF13O43567 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF13O43567 PTCHD3P3-201ENST00000403073 906 ntBASIC15.21■□□□□ 0.03
RNF13O43567 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF13O43567 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF13O43567 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RNF13O43567 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF13O43567 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF13O43567 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF13O43567 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF13O43567 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF13O43567 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.21■□□□□ 0.02
RNF13O43567 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RNF13O43567 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF13O43567 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF13O43567 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF13O43567 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF13O43567 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF13O43567 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF13O43567 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms