Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.79■□□□□ 0.28
SMAD6O43541 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 AC004449.1-201ENST00000564240 433 ntBASIC16.79■□□□□ 0.28
SMAD6O43541 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 AC073439.1-201ENST00000624121 1774 ntBASIC16.79■□□□□ 0.28
SMAD6O43541 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SMAD6O43541 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMAD6O43541 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
SMAD6O43541 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.79■□□□□ 0.28
SMAD6O43541 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 RBPMS2P1-201ENST00000437762 623 ntBASIC16.78■□□□□ 0.28
SMAD6O43541 HLA-J-202ENST00000469281 1241 ntBASIC16.78■□□□□ 0.28
SMAD6O43541 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
SMAD6O43541 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.78■□□□□ 0.28
SMAD6O43541 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 FOXO1B-201ENST00000504678 1527 ntBASIC16.78■□□□□ 0.28
SMAD6O43541 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.78■□□□□ 0.28
SMAD6O43541 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SMAD6O43541 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
SMAD6O43541 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.77■□□□□ 0.28
SMAD6O43541 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SMAD6O43541 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SMAD6O43541 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.77■□□□□ 0.28
SMAD6O43541 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.77■□□□□ 0.28
SMAD6O43541 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.77■□□□□ 0.28
SMAD6O43541 PRYP6-201ENST00000514804 343 ntBASIC16.77■□□□□ 0.28
SMAD6O43541 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.77■□□□□ 0.28
SMAD6O43541 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD6O43541 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.77■□□□□ 0.28
SMAD6O43541 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SMAD6O43541 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SMAD6O43541 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.77■□□□□ 0.27
SMAD6O43541 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD6O43541 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SMAD6O43541 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.77■□□□□ 0.27
SMAD6O43541 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
SMAD6O43541 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
SMAD6O43541 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 AC142381.1-201ENST00000426099 345 ntBASIC16.76■□□□□ 0.27
SMAD6O43541 AL645939.2-201ENST00000427340 991 ntBASIC16.76■□□□□ 0.27
SMAD6O43541 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMAD6O43541 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms