Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 POU5F1P6-201ENST00000466990 990 ntBASIC16.96■□□□□ 0.31
RIPK2O43353 AC022616.7-201ENST00000525383 220 ntBASIC16.96■□□□□ 0.31
RIPK2O43353 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.96■□□□□ 0.31
RIPK2O43353 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.96■□□□□ 0.31
RIPK2O43353 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RIPK2O43353 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.96■□□□□ 0.31
RIPK2O43353 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.96■□□□□ 0.3
RIPK2O43353 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RIPK2O43353 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RIPK2O43353 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RIPK2O43353 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 PCGF3-213ENST00000620529 1899 ntBASIC16.95■□□□□ 0.3
RIPK2O43353 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.95■□□□□ 0.3
RIPK2O43353 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.95■□□□□ 0.3
RIPK2O43353 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RIPK2O43353 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.95■□□□□ 0.3
RIPK2O43353 AL590326.2-201ENST00000625139 305 ntBASIC16.95■□□□□ 0.3
RIPK2O43353 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.95■□□□□ 0.3
RIPK2O43353 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.95■□□□□ 0.3
RIPK2O43353 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RIPK2O43353 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
RIPK2O43353 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.94■□□□□ 0.3
RIPK2O43353 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 MINOS1P3-201ENST00000457048 203 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 AC093827.2-201ENST00000512654 315 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 MPDU1-223ENST00000582151 728 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 AC079776.2-201ENST00000641154 1609 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.94■□□□□ 0.3
RIPK2O43353 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.94■□□□□ 0.3
RIPK2O43353 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.94■□□□□ 0.3
RIPK2O43353 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RIPK2O43353 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms