Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
MSI1O43347 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.29■□□□□ 0.36
MSI1O43347 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MSI1O43347 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
MSI1O43347 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 AL031731.1-201ENST00000642131 2094 ntBASIC17.28■□□□□ 0.36
MSI1O43347 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
MSI1O43347 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MSI1O43347 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
MSI1O43347 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.28■□□□□ 0.36
MSI1O43347 AC092183.1-201ENST00000469884 875 ntBASIC17.28■□□□□ 0.36
MSI1O43347 RN7SL589P-201ENST00000481268 310 ntBASIC17.28■□□□□ 0.36
MSI1O43347 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.28■□□□□ 0.36
MSI1O43347 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.28■□□□□ 0.36
MSI1O43347 FAM86C2P-203ENST00000528684 1004 ntBASIC17.28■□□□□ 0.36
MSI1O43347 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.28■□□□□ 0.36
MSI1O43347 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.28■□□□□ 0.36
MSI1O43347 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.28■□□□□ 0.36
MSI1O43347 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MSI1O43347 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MSI1O43347 AC006538.1-201ENST00000567905 1585 ntBASIC17.28■□□□□ 0.36
MSI1O43347 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 AKAP8P1-201ENST00000434743 1349 ntBASIC17.27■□□□□ 0.36
MSI1O43347 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
MSI1O43347 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.27■□□□□ 0.36
MSI1O43347 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MSI1O43347 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.27■□□□□ 0.36
MSI1O43347 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.27■□□□□ 0.36
MSI1O43347 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.27■□□□□ 0.36
MSI1O43347 SPCS2P4-201ENST00000436160 681 ntBASIC17.27■□□□□ 0.36
MSI1O43347 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.27■□□□□ 0.36
MSI1O43347 AC093520.2-201ENST00000561830 333 ntBASIC17.27■□□□□ 0.36
MSI1O43347 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.27■□□□□ 0.36
MSI1O43347 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.27■□□□□ 0.36
MSI1O43347 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.27■□□□□ 0.36
MSI1O43347 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MSI1O43347 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MSI1O43347 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MSI1O43347 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MSI1O43347 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MSI1O43347 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.27■□□□□ 0.35
MSI1O43347 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MSI1O43347 NKILA-202ENST00000614771 2598 ntBASIC17.27■□□□□ 0.35
MSI1O43347 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
MSI1O43347 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MSI1O43347 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MSI1O43347 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
MSI1O43347 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MSI1O43347 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms