Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC01451-201ENST00000623792 534 ntBASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL135999.2-201ENST00000622438 1686 ntBASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TMX2-CTNND1H3BSU7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC067863.1-201ENST00000494933 530 ntBASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC022145.2-201ENST00000598203 171 ntBASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.42■□□□□ 0.22
TMX2-CTNND1H3BSU7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC023824.1-201ENST00000562945 2975 ntBASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 ACTL9-202ENST00000612068 1252 ntBASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 AL136379.1-201ENST00000623471 2642 ntBASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TMX2-CTNND1H3BSU7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMX2-CTNND1H3BSU7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms