Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPIPA2E9PIF3 AC080080.1-201ENST00000625121 2420 ntBASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 AC005237.2-201ENST00000434368 219 ntBASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPA2E9PIF3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ADH5P3-201ENST00000433842 1137 ntBASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 KRT8P48-201ENST00000515599 1220 ntBASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 AL353732.1-201ENST00000569618 1459 ntBASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPA2E9PIF3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA2E9PIF3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms