Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC131009.4-201ENST00000624048 1740 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 MED15P5-201ENST00000423150 992 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC087641.1-201ENST00000557561 1021 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC096734.2-201ENST00000562054 433 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC013467.2-201ENST00000605472 835 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 AC007064.4-201ENST00000637740 555 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 PCDHB19P-201ENST00000570871 2371 ntBASIC16.68■□□□□ 0.26
CFAP99D6REC4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CFAP99D6REC4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CFAP99D6REC4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 AL391256.1-201ENST00000443260 1855 ntBASIC16.67■□□□□ 0.26
CFAP99D6REC4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 AC006277.1-201ENST00000624348 1610 ntBASIC16.67■□□□□ 0.26
CFAP99D6REC4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 ACTL9-202ENST00000612068 1252 ntBASIC16.67■□□□□ 0.26
CFAP99D6REC4 FAM197Y3-203ENST00000618346 717 ntBASIC16.67■□□□□ 0.26
CFAP99D6REC4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
CFAP99D6REC4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CFAP99D6REC4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CFAP99D6REC4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.66■□□□□ 0.26
CFAP99D6REC4 AC007967.2-201ENST00000432613 625 ntBASIC16.66■□□□□ 0.26
CFAP99D6REC4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms