Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.59□□□□□ -0.23
LINC00473A8K010 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00473A8K010 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00473A8K010 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00473A8K010 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.59□□□□□ -0.23
LINC00473A8K010 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.59□□□□□ -0.23
LINC00473A8K010 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC00473A8K010 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00473A8K010 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
LINC00473A8K010 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00473A8K010 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00473A8K010 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00473A8K010 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.58□□□□□ -0.23
LINC00473A8K010 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00473A8K010 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.58□□□□□ -0.23
LINC00473A8K010 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
LINC00473A8K010 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC00473A8K010 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.58□□□□□ -0.24
LINC00473A8K010 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 AC012313.10-201ENST00000623509 926 ntBASIC13.58□□□□□ -0.24
LINC00473A8K010 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 AL353732.1-201ENST00000569618 1459 ntBASIC13.58□□□□□ -0.24
LINC00473A8K010 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00473A8K010 GPAA1P2-202ENST00000606848 1787 ntBASIC13.58□□□□□ -0.24
LINC00473A8K010 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00473A8K010 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00473A8K010 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC00473A8K010 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00473A8K010 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00473A8K010 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00473A8K010 PCGF3-213ENST00000620529 1899 ntBASIC13.57□□□□□ -0.24
LINC00473A8K010 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00473A8K010 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC00473A8K010 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC00473A8K010 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00473A8K010 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00473A8K010 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms