Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 AL353732.1-201ENST00000569618 1459 ntBASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 PCGF3-213ENST00000620529 1899 ntBASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV7S3A2A0A539 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
TCRBV7S3A2A0A539 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 OR7E14P-202ENST00000530490 1290 ntBASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 AC012640.2-201ENST00000561606 901 ntBASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.95■□□□□ 0.3
TCRBV7S3A2A0A539 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 RNPS1P1-201ENST00000507437 918 ntBASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV7S3A2A0A539 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 AP002414.3-201ENST00000589352 1468 ntBASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
TCRBV7S3A2A0A539 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms