Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 AL391256.1-201ENST00000443260 1855 ntBASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
CDC42BPBQ9Y5S2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CDC42BPBQ9Y5S2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 AC104989.1-201ENST00000519711 778 ntBASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDC42BPBQ9Y5S2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AL603756.1-201ENST00000606511 2163 ntBASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 PCGF3-213ENST00000620529 1899 ntBASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC24.71■■□□□ 1.55
CDC42BPBQ9Y5S2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms