Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LINC02560-201ENST00000596379 459 ntBASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AL590560.3-201ENST00000623350 461 ntBASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AC008761.3-201ENST00000624803 892 ntBASIC17.32■□□□□ 0.36
YIPF1Q9Y548 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
YIPF1Q9Y548 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 MRPS18AP1-201ENST00000414458 589 ntBASIC17.31■□□□□ 0.36
YIPF1Q9Y548 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
YIPF1Q9Y548 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.3■□□□□ 0.36
YIPF1Q9Y548 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 MTND6P24-201ENST00000440466 518 ntBASIC17.3■□□□□ 0.36
YIPF1Q9Y548 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.3■□□□□ 0.36
YIPF1Q9Y548 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 AC190387.1-201ENST00000551683 408 ntBASIC17.3■□□□□ 0.36
YIPF1Q9Y548 BANF1P1-201ENST00000553684 263 ntBASIC17.3■□□□□ 0.36
YIPF1Q9Y548 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
YIPF1Q9Y548 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 AC093724.1-201ENST00000448659 1027 ntBASIC17.29■□□□□ 0.36
YIPF1Q9Y548 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.29■□□□□ 0.36
YIPF1Q9Y548 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms