Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 AL645728.1-201ENST00000366221 2101 ntBASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.41□□□□□ -0.58
LINC00588Q9Y4M8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 GPS2P2-201ENST00000430745 888 ntBASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AC093512.1-201ENST00000617969 520 ntBASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AP001059.3-201ENST00000619053 235 ntBASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 SNX33P1-201ENST00000592116 1762 ntBASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
LINC00588Q9Y4M8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC00588Q9Y4M8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 MIR346-201ENST00000362234 95 ntBASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 CNN2P2-201ENST00000443536 909 ntBASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 CNN2P3-201ENST00000450201 906 ntBASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 AC026150.2-201ENST00000564693 1156 ntBASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.39□□□□□ -0.59
LINC00588Q9Y4M8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms