Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 FAM220BP-201ENST00000377689 816 ntBASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
DNMT3BQ9UBC3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 AL353705.2-201ENST00000428243 662 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 RN7SL828P-201ENST00000607615 303 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 AC025048.6-201ENST00000634326 1161 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 SNX33P1-201ENST00000592116 1762 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 PCDHA12-202ENST00000613593 2588 ntBASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.29■□□□□ 0.36
DNMT3BQ9UBC3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AC092068.3-201ENST00000587894 2016 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 GK-202ENST00000378941 458 ntTSL 3 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 MTND6P24-201ENST00000440466 518 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 SPTLC1P1-201ENST00000447199 261 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AC009477.1-201ENST00000452936 217 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 TEX28P1-201ENST00000613479 1221 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 TEX28P2-201ENST00000617764 1221 ntBASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DNMT3BQ9UBC3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms